Where Is All the A.I.-Driven Scientific Progress?
39 min
•Dec 26, 20255 months agoSummary
Hard Fork hosts Sam Rodriguez, CEO of Future House, to explore the reality behind AI-driven scientific breakthroughs. Rodriguez discusses Cosmos, an AI scientist tool that can replicate six months of PhD-level research, while addressing hype around disease cures and explaining the actual bottlenecks in scientific progress—primarily clinical trials and experimental validation rather than discovery itself.
Insights
- AI's biggest near-term impact on science is accelerating data analysis and hypothesis generation, not eliminating the need for expensive, time-consuming clinical trials and experimental validation
- Claims of curing all diseases within a decade are unrealistic due to fundamental biological constraints (aging detection takes years, manufacturing scales slowly, patient recruitment is difficult), not just regulatory hurdles
- The distinction between modeling the natural world (protein folding, antibody design) and modeling the scientific process itself (hypothesis generation, data analysis) is critical to understanding where AI will have impact
- Scientists adopt new tools slowly due to conservative methodology preferences and inherited protocols, meaning widespread AI adoption in labs will take longer than tech industry timelines suggest
- Generative models for designing proteins, antibodies, and organisms from scratch represent the most transformative AI capability in science right now, with real-world applications emerging in 2025
Trends
AI agents for scientific research entering mainstream adoption phase in 2025-2026Shift from AI as analysis tool to AI as hypothesis generator and experimental designerGenerative design models (de novo antibody and organism design) becoming commercially viableBiomarker-based validation potentially replacing some traditional clinical trial phasesRobotics automation of lab workflows emerging as critical infrastructure for scaling AI-driven scienceFederal coordination of scientific data (Genesis mission) to enable AI discovery at scaleConservative adoption patterns in biology labs despite AI capabilities, driven by protocol inheritanceCost-benefit analysis shifting: $200 per AI analysis run justified when experiments cost $5,000-$10,000+Benchmarking challenges in AI for science (math Olympiad vs. disease curing outcomes)Serendipity preservation in AI systems through intentional noise injection and randomization
Topics
AI Agents for Scientific ResearchDe Novo Protein and Antibody DesignClinical Trial Bottlenecks in Drug DevelopmentAI-Driven Data Analysis and Literature SearchGenerative Models for BiologyScientific Hypothesis GenerationValidation and Reproducibility of AI FindingsRobotics for Lab AutomationBiomarker-Based Drug DevelopmentFederal AI-Science Coordination (Genesis Mission)Aging Research and Longevity ScienceType 2 Diabetes Genetic Variant DiscoveryAI Benchmarking in Mathematics vs. BiologySerendipity and Accidental Discovery in AI SystemsAdoption Barriers in Academic Biology Labs
Companies
Future House
Sam Rodriguez's nonprofit organization building AI agents for scientific research and discovery
Edison Scientific
For-profit spinout of Future House that commercializes Cosmos, an AI scientist tool for research
OpenAI
Language model provider used as part of Cosmos's multi-model architecture for scientific tasks
Google
Language model provider and developer of AI agents for science (co-scientists) mentioned alongside Future House
Anthropic
Language model provider integrated into Cosmos's multi-provider approach for scientific analysis
Chai Discovery
Company using generative models for de novo antibody design, cited as major 2025 breakthrough
Nabla
Biotech company advancing de novo antibody design with generative AI models
Arc Institute
Research organization that designed first organism from scratch (bacteriophage) using AI in 2025
New Limit
Organization building virtual cell models alongside Arc Institute and Chan Zuckerberg Initiative
Chan Zuckerberg Initiative
Funding organization supporting virtual cell modeling and AI-driven biological research
Neuralink
Brain-computer interface company making progress on BCIs, mentioned in overhyped/underhyped segment
People
Sam Rodriguez
Co-founder and CEO of Future House and Edison Scientific, PhD physicist from MIT, primary guest expert
Kevin Russo
Tech columnist at The New York Times, co-host of Hard Fork podcast
Casey Newton
Platformer writer and co-host of Hard Fork podcast
Dario Amodei
CEO of Anthropic, cited as making optimistic claims about AI solving scientific problems
Sam Altman
CEO of OpenAI, cited as making decade-long disease cure predictions via AI
Demis Hassabis
CEO of Google DeepMind, cited as making optimistic AI-for-science claims
Patrick Collison
Stripe CEO, mentioned discussing Arc Institute's virtual cell work in summer 2024
Brian He
Researcher at Arc Institute working on de novo organism design
Patrick Hsu
Researcher at Arc Institute leading organism design from scratch breakthrough
Quotes
"Cosmos is like the first thing that I think that we've made that actually really feels like an AI scientist when you're working with it. You go in, you give it a research objective, it goes away and it comes back with insights that are actually really deep and interesting and sometimes wrong. But about 80 percent of the time, right."
Sam Rodriguez
"A decade is crazy. Because for the reason that we were talking about before, you have to run clinical trials, right? If we had a drug right now that prevented aging, completely halted aging in humans, you would not know for 10 years because you can't detect in humans whether or not they're aging for like at least like, you know, five or 10 years."
Sam Rodriguez
"What AI will allow us to do is it will allow us to discover a lot of things where we already have the information to discover it. We just haven't figured that out yet. You should not expect that you're one day going to like get GPT seven and just like ask it, how do you cure Alzheimer's? And it will just tell you."
Sam Rodriguez
"Scientists in general are extremely conservative people because if you're running an experiment, you like never actually fully know in biology at least. You usually do not like fully understand like why the experiment works and why not. There's something that you've inherited from protocols that you've run in the past."
Sam Rodriguez
"2026 is going to be the year when we just see these agents start to like infiltrate everything, right? Infiltrate labs, infiltrate people's normal life. I mean, it's already happening."
Sam Rodriguez
Full Transcript
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I obviously lost my shit. The absolute best is that the students start singing and they just sound like shit. That's like my nightmare sweet. Just imagine you're one of these kids and you're not that... It's just like after school class. It's a little club. You're just doing it for a little bit of enrichment and you're just kind of plotting while you're trying to get through the day and then fucking Cynthia Riva shows up and they're like, all right, kid, you're up next. What do you got? No thanks. No, it was so sweet. I would throw up. It was so sweet. I'm Kevin Russo. Tech columnist at The New York Times. I'm Casey Newn from Plattformer. And this is hard fork. This week, Future House CEO Sam Rodriguez joins us in the studio to separate the hype from the reality of AI science. Well, Casey, it's time for some science. Yeah. Give me a second, Kevin. I'm just going to put on my lab coat here, get up my bunsen burner and see what you've got cooking for us today. So I have been obsessed with this question of what AI is and isn't doing for science and scientific discovery. Obviously this is something we hear a lot about from the leaders of the big AI companies, people like Dario Amade, Sam Altman, Demis Asabas. They have all been saying things in recent months about how close they believe we are to solving new scientific problems and curing diseases and fixing the climate with all of these new AI tools that they're building. And some of that is obviously hype or at least has the sort of markings of hype. But there's actually a lot of real stuff going on in AI and science that I just do not feel personally qualified to evaluate. Yeah. And I would also say that science has become one of the main ways that the leaders of these tech companies want us to evaluate them because whenever one of their models does something horrible, the message we basically get back in response is, don't worry, we're about to cure cancer. Just hang on tight. I know that this chatbot might be driving you to madness, but if you could just give us a few more releases, we're going to do some really good stuff. Yes. And this is something that we're also hearing now from the US government. The Genesis mission was announced by the White House just before Thanksgiving. That is what they're calling a dedicated, coordinated national effort to unleash a new age of AI, accelerate innovation and discovery that can solve the most challenging problems of this century. I thought the Genesis mission was just them trying to get Phil Collins to play the White House Christmas party. I guess not. And so today we have brought in a bona fide scientist to help us understand which of the sort of scientific discoveries and possibilities out there are real and which are not. We need an expert with a broad focus, someone tracking the impact of AI, not just on biotech or drug discovery, but across the different sciences. And Casey, we have found the perfect person. Let's hear about him. Sam Rodriguez is the co-founder and CEO of Future House and Edison Scientific, which is a San Francisco based, I guess it's both a nonprofit and a for-profit. Future House is the nonprofit. Where have I heard that before? Yes. Come back when he has his board coup. Future House is the nonprofit. Edison Scientific is the for-profit that spun out of it. I've been to their office in Dogpatch. It's really fun. It sort of feels like a kind of wacky mad scientist lab. They've got all these like, you know, sort of lab machines that I don't understand. And, you know, people running around in lab coats and they're all talking about AI. And it just feels like kind of a cool place to be. And they are building what Sam calls an AI scientist, which is an AI agent that can do sort of parts of the process of scientific research. And Sam was also himself a scientist. He has a PhD in physics from MIT. And before he launched Future House, he spent several years running an applied biotech lab. So he has sort of seen this stuff happening from a couple of different angles. Yeah. And today we want to talk to him about what he is up to, but also kind of get his vision of the entire landscape. Tell us what is working, what isn't, where's the hype, where's the real stuff? Sam has a lot to say about it. Yes. And I think it's fair to say that Sam is on the more optimistic end of the spectrum of beliefs about what AI will do for science. But as you'll hear in our conversation, he's more skeptical than some of the most optimistic people who are claiming that we'll cure all disease in five or 10 years. Yeah. If you've been craving a little bit of cold water for the wildest projections, he has some of that to offer you. So let's bring him in. When we come back, we'll be joined by Sam Rodriguez. Most all in one HR systems are a patchwork of disconnected and manual tools. 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See it for yourself at nytimes.com slash Indeed Off the Clock. We've all been there. Your team's feedback is scattered across emails, chats and sticky notes. It's a mess. But PDF spaces in Adobe Acrobat gives you one collaborative workspace to streamline every file and comment. So if you need six departments to finally agree on a proposal, do that with Acrobat. Need to turn a mountain of feedback into one plan of action? Do that with Acrobat. Want to stop searching for files and finally get everyone on the same page? Do that. Do that. Do that with Acrobat. Learn more at Adobe.com slash do that with Acrobat. Sam Rodriguez, welcome to Hard Fork. Hello, thank you. So we have brought you here today to be our science expert, our guide to the biggest recent AI powered breakthroughs that are happening in science. This is an area that I sort of understand in an ambient way is important. And there are big things happening, but neither of us are scientists, although I did make a killer baking soda volcano in elementary school. So we have so much to talk about today. But before we get into some of the particulars, I want to ask you about your project that you've been working on. Last month, the commercial arm of your nonprofit, which is called Edison Scientific, launched a new AI scientist called Cosmos that you say can accomplish work equivalent to six months of a PhD or postdoctoral scientist in a single run of this model. Tell us about how Cosmos works and where that six month number comes from. Yeah, exactly. And actually, I will just like start out by saying that when I got that six month number, my reaction originally was like, there is no way that this is true. Right. And we've now measured in a bunch of different ways. I can walk you guys through that. But basically, just to take a step back. So we've been working for two years on how to build an AI scientist. And the concept here is there's so much more science that we can do than we have scientists. Right. And so how do we scale up science? And the thing that is that happened with Cosmos that is pretty cool is Cosmos is like the first thing that I think that we've made that actually really feels like an AI scientist when you're working with it. Right. Which is to say that you go in, you give it a research objective, it goes away and it comes back with insights that are actually really deep and interesting and sometimes wrong. But about 80 percent of the time, right. Which is like kind of similar to like if you ask a human to go away and do something comes back like similar percentage of the time is right. And it's like it's a kind of new experience working with it. So that's all that's very exciting. The six month number specifically, the way that we measured this was we had a bunch of academic collaborators. You know, scientists who had done a bunch of science previously that they had not published yet. And we basically gave the same research directive and the same data set to the AI to Cosmos and we ask it, you know, to go away and just make new discoveries. And it would come back and it had found the same things that the researchers had found overnight. And then you go and you ask the researchers, you know, how long did it take you to find this in the first place? And they would say like three months, five months, like six months, whatever. And so that's where it comes from. And it's like that's the amount of time that it took them to come up with the finding. Right. So let me just ask a couple of questions so I can ground myself here. Is is this tool kind of a box you type into like the other chatbots? And if so, what is powering it? Did you guys sort of build your own model from scratch? Did you sort of, you know, make fine tune minst, fine tunings to another company's model? Yeah, yeah. So it is, it is indeed a box that you basically type into. You ask a research objective. It's not a chatbot, right? Like it runs for 12 hours or so before eventually coming back to you with with its findings in terms of how it's built. We build on top of a bunch of different language models from OpenAI, from Google, from Anthropic, like in any given run, we use models from all the different providers. We also have like our own models for specific tasks that we've trained internally, where those models are like much better for the specific tasks that we train them on than the models that the frontier providers make. Got it. And then the key insight in Cosmos is basically this use of what we call like a structured world model. So one of the main limitations with AI systems today is that they're just limited in the length of the task and the sophistication of the task that they can carry out before they kind of go off the rails. They like, you know, forget what they're doing. They no longer are on task. And what we figured out was a way to have them contributing to this world model that gets built up over time, that basically describes like the full state of knowledge about the task that they're working on, which then means that we can orchestrate hundreds of like different agents running in parallel, running in series, and have them all working towards a coherent goal. And that was like the real on-mob. Right. Another thing that I found interesting about Cosmos is the cost. This model costs $200 per prompt. So every time you give it a task, you're paying $200. Why is it so expensive? I mean, it uses a lot of compute. I mean, that's like the fundamental answer is it uses a lot of compute, right? Give us a sense of how much. Well, so an individual run from Cosmos will write 42,000 lines of code and read 1,500 research papers on average. Like if you run Claude, it might write like a few hundred lines of code. Right. So that gives you some sense. It's like there's a lot of compute that is going into this. Have you ever had like a scientist whose cat walks across the keyboard and accidentally hits entered and all of a sudden spends like $600? This is a problem. And we were like, right. So the thing that you have to understand is that if you are a scientist and you go and do an experiment, you get some data back. You're going to spend five or $10,000 gathering that data. And so what scientists want is they want the absolute best performance that they can get. And like scientists who have used Cosmos generally come back to me and are like, they can't believe we're only charging $200 for it. Right. And I will say like, you know, $200 right now is a is a promotional price. We actually have to eventually charge more. It's going up. So get those prompts in before Christmas. Get those prompts in. Yeah, exactly. But like, but really, you know, it's like, if you have to spend thousands of dollars gathering the data, like the cost at the end of the day is not the limitation. We do have to be very generous with refunds because people have, you know, make mistakes over time. Yeah, exactly. Yeah. So what you just mentioned about the sort of the test that you all ran to figure out how long this thing could run for, how much time it was saving scientists, that's about like sort of replicating existing research that's that's out there. But a lot of what we hear from the people who are running these big AI labs is the possibility that pretty soon AI will start making novel scientific discoveries, will start doing things that existing scientific methods and processes can't do. How close are we to that? That's already happening, actually. So if you go and you read the paper that we put out about about Cosmos, we put out seven conclusions that had come to three of which were replications of existing findings, four of which are net new contributions of the scientific literature, like new discovery. And of those, what's the most impressive? So I like one of the ones that that we really like the human genome contains millions of genetic variants, right? These are differences between different people's DNA that are associated with disease. And for the most part, we know that a variant is associated with a disease, but we have no idea why, right? And so we asked Cosmos, we gave it a bunch of raw data about a huge number of different genetic factors. So like what the variants are, what proteins bind near the variants, right, like all these kinds of things. And just asked it for type two diabetes to go and, you know, identify a mechanism associated with one of these variants. And it came back and it identified this was a variant that was not in a gene and Cosmos identified that this is actually somewhere where a different protein binds. It was able to identify what protein binds and what gene is being expressed and connected that to the actual mechanism of that gene, SSR1, which is involved in the pancreas in secreting insulin, right? OK, so so in this case is what I'm hearing that your model was able to do some very fancy reasoning over some existing data and identify something that sort of no other human scientist had gotten around to and might not have for a really long time. Yeah, that's right. OK. And I think science generally consists of deciding what data to gather, gathering that data and then drawing conclusions. And so at this point, basically, it's like step number three that Cosmos is aimed at, you know, and you left out Step Zero, which was getting the Trump administration to unfreeze your fund. But everything else was right. So what happens when you get a discovery like this from Cosmos? Do you have to then go validate it? Do you hand it to like a team of researchers who then have to like make sure it works or like what happens next? Yeah, absolutely. You have to go and validate it. And so that's actually one of the things also, you know, in the paper, actually, we describe how we went and validated that particular variant. In general, when people are using it, yeah, you go in. I mean, actually, literally when you run a Cosmos run, the first thing you have to do is you have to understand what's telling you, because it has just done something that scientists think is like six months worth of work. And you're going to sit there for a long time, just like reading and understanding it. Once you've read it and understood it, then, yes, indeed, you're going to go and you're going to run, you know, various experiments, do your own analysis, cross-reference to try to like convince yourself that this is true. And then based on what your research objective is, you'll decide next steps. Right. You know, in this case, I think it's probably low likelihood there's a new drug target like from this particular finding, right? But you could go and you could run this on other findings. And then eventually maybe you find new drug target, you start a drug program. That's, you know. So one concern that I've heard people express about models like Cosmos is that this is just like sort of not where the roadblocks are, that the sort of reason that we don't have more AI discovered drugs and designed drugs out there curing diseases is not actually because like we don't have the research methods to discover those. It's because there's like, you got to go to trials and you got to work through human subjects and you got to get FDA approval. Like all that stuff just takes a lot longer than the actual discovery of the drug. So what problems are models like these helping to solve in our scientific process right now? So, so absolutely. I actually like, you know, I really agree that like the bottleneck at the end of the day in solving medicine is basically, you know, clinical trials. I mean, and the easiest way to see this is if you look at the number of diseases that we like know how to cure in mice, right, it's like astronomical because obviously you can just like run experiments. And in humans, things are just slow. That said, if you think that every experiment that is being run right now by pharma companies, like every clinical trial that's being run is like optimally planned and optimally, you know, conceived, given the full state of knowledge, you are off your rocker, right? There's like no way. And those experiments cost hundreds of millions of dollars. And so the question is like, we do at the end of the day have to run clinical trials. How do we make sure that those experiments are the best experiments we could possibly be running? Given all the knowledge that we have, given all the data we have, there's so much data that we have that has insights in it that are waiting to be found where we just like do not have people to go and find them. And that's ultimately going to feed into better experiments, better trials, right? Well, so I'm curious how you see like your tool fitting into the workflow of today's scientist. Is it the sort of thing where like I have completed my experiments and now I want some help doing some analysis? Is it I have all these old experiments that I only did a little bit of analysis on. And I'm curious if I can like sort of squeeze any more juice out of them. Or like, like, what other ways are you seeing the AI being like really good right now for a working scientist? Yeah, yeah, great question. So so going back to me in 2019, which is when I was wrapping up my PhD, right, I had this gigantic data set and I wanted to graduate because I was a PhD student, which meant that I was making like, you know, $40,000 a year or something on. And like, there were some great opportunities to go out and like, don't be a PhD student anymore. OK, so I spent six months literally just like sitting at my desk, like trying to analyze the data and drawing conclusions, reading papers, right? For right now, that's what that's where Cosmos fits in. It's like, you know, you would just take that data that you give it to Cosmos. It comes up with a lot of findings. Right now, you need to go and do a bunch of manual work to validate those findings and so on pretty soon. It's going to come with findings and you're going to be like, great. Sam, I'm curious if you could help sort of give us and our listeners a state of the world of science right now. Recently, the White House announced what it's calling the Genesis mission, which is a federal effort to kind of corral and harness all of these data sets that the federal government is sitting on and use them to do new scientific exploring. We also have lots of efforts, including yours, but lots of things going on in and around the tech industry, the biotech industry, people doing AI for materials science. Give us a sense of like the lay of the land of like what's hot right now in AI science, where is the effort and money going? Right. In order to understand the landscape of AI and science, the first thing like fundamentally that you have to understand is that AI is about building models. Right. So for example, right, like a language model, like what is a language model is fundamentally a model of human language. It just so happens that when you build a model of human language, it like learns how to think like a human in some sense, because humans like encode their thoughts in language. This is like one of the greatest discoveries, right? Certainly the 21st century, maybe of all time. So similarly, when we talk about AI and science, what you have to think about is that you are modeling things. That is what AI does. And there are kind of two fundamental categories. There's modeling the natural world, right? And there's modeling the process of doing science. These things are fundamentally different. And the reason to make this distinction is because, you know, what we are doing, right? We are modeling the process of doing science. The other side of the AI for science world is building models that can, for example, predict the structure of proteins that can generate a new antibody, that can create a new organism from scratch, which are all things that have kind of like happened in 2025, where there's just a huge amount of momentum. Yeah, that makes sense. I mean, of the things that are happening in the part of the sort of process of modeling the natural world, you mentioned protein folding, novel organisms, like what has most excited you as a scientist that you've seen? So it's absolutely what's most exciting right now, I think, without a doubt is this trend towards what we call generative models. So these are things where these are models that can produce examples of, you know, proteins or antibodies or whatever that have desired characteristics, basically from scratch. This is a new capability that we have never had before. And it's huge. I'm curious about the reliability piece as you're running all of these experiments. You know, I saw this going around on social media this week. I reproduced it myself. If you asked Google is 2026 next year, it said no, 2026 is not next year. It is the year after next. So in such a world, Sam, some people might get concerned at the idea that we're now interesting the AI with all of our data analysis. So how much time are scientists having to spend and go back and essentially rechecking the work of the AIs and what kind of tax does that place on their work? Yeah, this is very funny. I mean, look, you have to spend a lot of time going back and checking. Yeah. But like to be clear, this is true, regardless of whether or not an AI does it or whether you ask a friend to do it. If you're going to publish a paper, you damn well, better go back and check it and like be sure that you are confident. And it's never going to be 100 percent. Right. The best you're going to do is you're going to get to a place where it is similarly good to if you were doing it yourself, which is not 100 percent, because you're not infallible, right? And checking the work is like always going to be faster than producing it in the first place. Got it. Right. By a lot. A lot of our biggest scientific breakthroughs in history have come from these kind of strange accidents, these moments of serendipity, you know, penicillin starts growing in a Petri dish, and we just go, oh my God, you know, this is great. Does AI preserve that kind of serendipity, those kinds of accidents, or do they sort of optimize it away? Yeah, this is a great question. And the fact of the matter is we just say really don't know yet. This is going to be a really important core question that a lot of people are asking. What's your intuition? I mean, I think that they probably will because they probably will preserve it because penicillin, my understanding is that basically like the window was left open on some agar with like no antibiotic. And it obviously didn't have antibiotics. This was the discovery of the first one, right? So the window was left open with some agar and like, you know, some spores flew on to it and began growing and they observed that the bacteria was inhibited. Right. That's a mistake. Someone screwed up. Right. And that mistake led to something fantastic. And you will have mistakes, I think that will be preserved. But in the meantime, scientists should always leave their windows open. You'd never know it's going to happen. You have no, you know, seriously, though, like there's so much when you get a graduate student in academia, right, when you get graduate students, first year graduates, they have no idea what to do. They have no idea what to do. And that is a huge source of scientific progress because they just do the most random, kooky stuff that no one who knew anything, who knows anything, would ever think to do. And it's actually, it's actually really important. It's like, I want your like, as scientists model to hallucinate a little bit. Totally. So that it doesn't lose that quality of like, yeah. We talk about this as just like adding noise in order to, this is actually important for like biological evolution also, right? Like the genome has a lot of noise and that's how the, the evolution randomly comes up with like new stuff is like, there's a protein that like, it's just totally random, doesn't do anything. Then one day all of a sudden, oops, it does something. And that's great. Right. So. What do you make of the leaders of the big AI labs, people like Demis and Dario and Sam Altman, who are saying, you know, AI is going to allow us to cure all diseases or most diseases within the next decade or two. Decade is crazy. Oh, and I'm happy to take a very strong stance on this because if I'm wrong, it's a great thing, right? But if I'm wrong, everyone wins. But like a decade is crazy. Why is it crazy? Because for the reason that we were talking about before, you have to run clinical trials, right? If we had a drug right now that prevented aging, completely halted aging in humans or on, you know, between the ages of like 25 and 65 or something, um, you would not know for 10 years because you can't detect in humans in that age range, whether or not they're aging for like at least like, you know, five or 10 years. And you don't detect from one year to the next that you're aging. So you won't know if the thing is working. I don't know. Some people at my 10 year high school reunion were already looking pretty cool. I hate to say it. I did say 25. Yeah. Okay. But, but, but, but right. I mean, you know, so, uh, we have to conduct experiments. Those conspire experiments will take time. Now, will we, like 30 years, I think is very plausible. We don't know what is going to be possible. We don't know if it's possible to halt aging. We don't know if it's possible to like cure all diseases or whatever. But they're like between now and 30 years from now, I think you should expect to see a humongous leap forward in terms of. Let me drill in on that a bit there, because I think some people might hear that in saying that like this is essentially a regulatory issue that like we just don't have, you know, the FDA set up to measure this. I'm curious about the, the experimental side of it though, right? Because my understanding is like, we don't really have enough biologists to run all the experiments that we might not have like the funding to, to fund the experiments. And you did raise the point that some of these experiments just actually take a long time to run, right? So like, what are all of the factors that in your mind are just going to make it so hard to see these diseases? You have to go and you have to like, you know, even supposing you have a molecule that you want to test in a human and you know which humans you want to test it in, you have to go and make it, right? Humans are big. They require like a lot of it. You have to make sure it's like high enough grade that you can actually put it into a human. You have to find the patients, which means forming relationships with the doctors, right? Actually, you know, waiting until you have enough patients who are willing to do it for many diseases, like there just aren't that many patients. And so finding the patients is hard, right? And it just, and then you have to actually dose them. You have to wait and see what happens, right? Even with no regulation, it would be slow. And there's no AI shortcut for almost any of that, at least not right now. No, like there, there, what AI will allow us to do is it will allow us to discover a lot of things where we already have the information to discover it. We just haven't figured that out yet. You should not expect that you're one day going to like get GPT seven and just like ask it, how do you cure Alzheimer's? And it will just tell you my expectation is that there is not enough knowledge where we do not have enough knowledge to solve it in principle, even with infinite intelligence, right? Like with infinite intelligence, there would still be some things that are just not known about the world where we have to conduct the experiments to see. You'll be able to plan the best possible experiment, given everything it's known, but you will not just be able to like, you know, de novo kind of figure it out. Right. Casey, I took Latin. That means from new. Oh, thank you. Thank you. That's saved me a step of Googling. When we come back, we'll play a game of overhyped or underhyped with our guests. Sam Rodriguez. Most all in one HR systems are a patchwork of disconnected and manual tools. Rippling is totally automated. If you promote an employee, Rippling can automatically handle necessary updates from payroll taxes and provisioning new app permissions to assigning required manager training. That's why Rippling is the number one rated human capital management suite on G2, Trustradius and Gartner. If you're ready to run the backbone of your business on one unified platform, head to rippling.com slash hard fork and sign up today. That's RIPP, LING.com slash hard fork to sign up. The right technology can strengthen human judgment. That's why Deloitte brings together AI and data analytics with multi-disciplinary teams who can help you connect the dots across your enterprise from risk to operations to customer needs. So opportunities don't slip by and surprises don't spread because the smarter your systems, the sharper your instincts. That's how technology makes people better at what they do best. Deloitte together makes progress. Learn more at Deloitte.com slash together makes progress. Framer is a website builder that turns dot coms from a formality into a tool for growth. Whether you want to launch a new site, test a few landing pages or migrate your full dot com. Framer has programs for startups, scale ups and large enterprises to make going from idea to live site as easy and fast as possible. Learn how you can get more out of your dot com from a Framer specialist or get started building for free today at Framer.com slash hard fork for 30% off a Framer pro annual plan. Rules and restrictions may apply. This isn't quite science per se, but I'm curious what you make of this. Sam, all of the big AI labs are obsessed with math, with winning the international math Olympiad, with putting up a gold medal score, with solving these unproven math theorems. And I have a take about this, which is that I believe that this is because these labs are filled with people who were themselves competitive. Math elites in high school and took part in the IMO and did pretty well. And a lot of those people think that like AGI will just sort of be like a slightly smarter version of them. But I'm curious, like why are these places so obsessed with math as being one of these sort of first places that they want to make a lot of progress? There are two reasons. I think that one of the reasons is exactly what you just said. It's just familiar, right? But the other reason is that you can measure progress, right? So ultimately, like what drives progress in machine learning, a big part of what drives progress is benchmarks. With math, you can tell whether or not your proof is right. And there's kind of like an infinite number of things to go and prove. So it's just like really easy to tell whether or not you're getting better. And things like the IMO just present like great opportunities. By contrast, if you look at like some of the biggest breakthroughs recently, you know, biggest breakthroughs this year in AI for biology, right? Things like, you know, Chai Discovery, NABLA coming up with these like extremely good models for producing antibodies to NOVO, right? Huge breakthrough. But like ultimately, the win for them is going to be like when it's approved in a human and that might be another five years or something. Arch Institute putting out like the first time anyone has designed an organism from scratch, they designed a bacteriophage. It's the kind of virus that infects bacteria. Incredible, right? But like just harder to evaluate. Like how good is it? Like you're not going to release it into the wild. And so it's harder to evaluate. Whereas like the IMO is just like super clean. And so I think that's one thing that we think about a lot is just like, you know, how do we get really clear benchmarks that we can pursue to measure whether or not we're doing a good job at science? I have an answer here. International Cancer Curing Olympiad. I like that. Should we start this? I think that would be great. We can give people a medal if they win. Let's get on it, Labs. So when the CEOs or the leaders of these companies make these statements about how we're going to cure all disease using AI in the next 10 years or 15 years or whatever that whatever timeline they give, are they doing that because they don't understand the bottlenecks? I mean, these are very smart people. So what are they not seeing? Or are they just doing this as sort of a marketing exercise? Is this an attempt to get people excited about AI who might otherwise be freaked out about it? Why are they giving these projections? No, look, I mean, I think that they are reasonable people could disagree. There are lots of reasons why you could argue that like actually the models will get super smart and they will figure out ways to measure whether or not we're making progress before you run a clinical trial and that will increase the iteration cycle. Right. Like there are reasonable arguments to be made about that. Right. Like, you know, that we are just going to not do full clinical trials anymore. We'll just like use biomarkers. Like that's not crazy. And that's one way that I could be wrong. And maybe in 10 years we do have cures for all diseases. So that's part of it. Like obviously there's there's part of it, which is that they want to hype the thing. Part of it is that, you know, does Sam Altman like really intimately understand like what it takes to go and manufacture like like scale up manufacturing for a small molecule to put into the clinic? Like probably not. Right. So there's a mixture. I don't think any of it's in bad faith. It's just people are very excited. There will be a little bit of a collision with reality at some point. We're going to see exactly where that is. But regardless, the future is going to be awesome. At this moment in 2025, how much do you think AI tools have changed the life of a working scientist and how different do you expect that will be a year from now? I think that you'd be shocked to the extent that they have not yet. Scientists in general are extremely conservative people because if you're running an experiment, you like never actually fully know in biology at least. You usually do not like fully understand like why the experiment works and why not. There's something that you've inherited from protocols that you've run in the past and where it's like we do it this way, you could go and test it, but there are way too many things to test. So you're just kind of like locked in in your methods and it's what works. And you just want to do what works. And so for that reason, like biologists just adopt new methods slowly. I think most labs around the world are still probably doing science the way they've done it before and probably will continue to do so for a while. And that's okay. You know, one place I think with coding, a lot of people are already adopting it because in biology, historically, coding has been a big bottleneck. It's a huge unlock now that biologists who didn't know how to code can like do a lot of coding using cloud code, using opening as models, Gemini, et cetera. So that's a huge unlock. I think that that's going to see a lot of adoption quickly. Literature search, right? Like being able to parse the immensity of the scientific literature. That's a huge unlock. That's going to get adopted very quickly. Right. The tools like what we're building are like a little bit more frontier. Ultimately, people adopt them when they see other people using them and getting great results. Sam, can we play a little lightning round game here with you? Yeah. We're calling this one overhyped underhyped. So we'll tell you something and you tell us whether in your scientific opinion it is overhyped or underhyped. Right. You ready? Yeah. Vibe proving. This is when AI systems go out and like write math proofs. Probably just if I have a forced choice, probably overhyped. It's great for, I mean, it's great as like a progress driver in AI. It's like, and we'll probably have not, you know, being good at it. We'll probably have implications elsewhere. But is it itself that useful? I'm not sure. Robotics for AI lab automation. Robotics for automating AI labs or. Yes. Or for for automating scientific labs. What robots for automating scientific labs? I think appropriately hyped. It is going to be totally transformative. The technology is not at all there yet. There's a lot that we need to do, but like, yeah, probably appropriately hyped. Alpha fold three. That's an interesting one. I mean, I think that I would say probably like underhyped in that. I think like all of the protein structure models, there's a lot of hype around them, but there's still there's still probably like they're going to be extremely transformative. So maybe I would I would I would say probably underhyped. It's a hard it's there's a lot of hype around it though. So it's a hard decision to make, but. Virtual cells like we heard from Patrick Collison this summer about what the ARC Institute has done with making a virtual cell. This is overhyped, but for a specific reason, right? Like the models that they're building at ARC are awesome. The models and they're doing similar things at like New Limit, Chan Zuckerberg, right? Like many of these places, many of these great companies and great organizations are doing it. I think that like calling it a virtual cell like is a little bit that's like a little bit over. That's overhyped, right? Like ultimately those model that kind of model model something like very specific, like actually building like a true virtual cell, like being able to simulate a cell in a computer is an amazing goal. We are very far away from that. Quantum computing. Overhyped. Brain computer interfaces. I'm also, oh man, this one's really hard. I'm going to say overhyped. I'm a huge believer in in BCIs. I think like effective BCIs are the way that we imagine them in sci-fi are further out than people imagine. Even like Neuralink is making amazing progress. Casey's got one in his head right now. Yeah. It's on the fritz. Yeah. There are a lot of great people who are making progress there, but it's further out, I think, than people think. So we're nearing the end of the year. If we can put you in a bit of a reflective mode, what do you think were the top three AI driven scientific advancements this year? Yeah, I think that honestly, like this year is the year has been the year of agents. This was the year when people discovered agents. And so I do like, you know, in good faith, have to put myself, I have to put us on that list. Also with Google co-scientists, I mean, we're not the only people who are working on this. You know, Google has been doing a great job. There are a bunch of other people. So AI agents for science, definitely. And then like generative design is just having a huge moment, right? So the other ones would probably be the work that Chai has been doing, the work that Nabilah has been doing, and many others on DeNovo antibody design. I'm really glad you defined DeNovo earlier in the broadcast, by the way. It's come up a lot. Yes. Sorry, when I say DeNovo, I just mean like literally you just like, it generates it from scratch. You don't give it anything, right? You just like, or you give it a target that you want it to bind to and it generates it from scratch. This is huge because like basically the promise that companies like Chai, Nabilah and so on are going after is a world in which you can say like, we know to cure this disease, we have to target that protein. You click a button and you have an antibody that you can go and put in humans tomorrow. It's huge. It cuts out an enormous amount of what people want to do pre-disease. So that's a huge one. And the third one, I just think like what Brian He, Patrick Hsu and so on at the Arkansas Institute have done with like generating organisms to know. Sorry, generating organisms from scratch. We can say it. We know what it means now. That's the important thing. This is our like Pee Wee's Playhouse word of the week. The DeNovo design of organisms. Is it useful? I don't know. Is it awesome? Like absolutely. It's so it's such a big breakthrough. And Sam, what should we be watching for next year? What are you excited about that may be coming down the pipe for 2026? Honestly, it is again going to be the agents that see an explosion. We are right now at like the beginning of that S curve, and that is going to continue. Maybe a year ago, I would tell people that I thought in 2026 or maybe 2027 that like the majority of the high quality hypotheses that are generated by the scientific community would be generated like by us or by like agents that are like the ones that we're building. And when I said it in 2024, I thought I was overhypid, right? I mean, I was just like, I need some hype. At this point, it may be real. I mean, I think 2026 would be ambitious for that. I mean, that's a huge right for the majority of the good hypotheses that come out to be made by agents. That's a huge leap. But like 2027. Yeah, man. I mean, 2026 is going to be the year when we just see these agents start to like infiltrate everything, right? Infiltrate labs, infiltrate people's normal life. I mean, it's already happening. Cool. Yeah. Well, I look forward to it. Sam, thank you so much for giving us the science education that we clearly didn't get in school. Yeah, you've really given us some de novo things to think about. I appreciate that. Good. Thank you. FrameR is a website builder that turns dot coms from a formality into a tool for growth. Whether you want to launch a new site, test a few landing pages or migrate your full dot com, FrameR has programs for startups, scale ups and large enterprises to make going from idea to live site as easy and fast as possible. Learn how you can get more out of your dot com from a FrameR specialist or get started building for free today at frameR dot com slash hard fork for 30% off a FrameR pro annual plan rules and restrictions may apply. Over the last few decades, the world has witnessed incredible progress from dial up modems to 5G connectivity from massive PC towers to enabled microchips. Innovators are rethinking possibilities every day. 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Deloitte Together Makes Progress. Learn more at Deloitte.com slash Together Makes Progress. Hartfork is produced by Rachel Cohn and Whitney Jones. We're edited by Jen Poignanne. Today's show was fact-checked by Will Peischel and engineered by Chris Wood. Original music by Diane Wong, Rowan Nemistow, Alyssa Moxley and Dan Powell. Video production by Soya Roké, Pat Gunther, Jake Nicholl and Chris Schott. You can watch this whole episode on YouTube at youtube.com slash Hartfork. Special thanks to Paula Schumann, Puiwing Tam and Dalia Haddad. You can email us at Hartfork at nytimes.com. You don't change the game without asking big questions like what would you like the power to do? My answers motivated me to help lead the first US women's national team and bring home two FIFA women's World Cup trophies. Bank of America champions US women's soccer legend Michelle Akers and everyone who dares to ask, what would you like the power to do? 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